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2020

Wolff, P; Villette, C; Zumsteg, J; Heintz, D; Antoine, L; Chane-Woon-Ming, B; Droogmans, L; Grosjean, H; Westhof, E

Comparative patterns of modified nucleotides in individual tRNA species from a mesophilic and two thermophilic archaea Article de journal

RNA, p. in press, 2020, ISBN: 32994183.

Résumé | Liens | BibTeX | Étiquettes: ENNIFAR, Unité ARN, WESTHOF, WESTHOF ENNIFAR (hyper)thermophiles Archaea mass spectrometry modifications tRNA

Westhof, E; Liang, S; Tong, X; Ding, X; Zheng, L; Dai, F

Unusual tertiary pairs in eukaryotic tRNA-Ala Article de journal

RNA, p. in press, 2020, ISBN: 32737189.

Résumé | Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF, WESTHOF Ala Gly insects mammals tRNA.

Ali, L M; Pitchai, F N; Vivet-Boudou, V; Chameettachal, A; Jabeen, A; Pillai, V N; Mustafa, F; Marquet, R; Rizvi, T A

Role of purine-rich regions in Mason-Pfizer monkey virus (MPMV) Genomic RNA Packaging and propagation Article de journal

Front Microbiol, p. in press, 2020.

Liens | BibTeX | Étiquettes: MARQUET, MARQUET PAILLART, Unité ARN

Antoine, L; Wolff, P

Mapping of Posttranscriptional tRNA Modifications by Two-Dimensional Gel Electrophoresis Mass Spectrometry Book Chapter

Arluison, V; Wien, F (Ed.): RNA Spectroscopy: Methods and Protocols, 2113 , p. 101-110, Springer Protocols, Humana Press, New York, NY, 2020, ISBN: 32006310.

Résumé | Liens | BibTeX | Étiquettes: ENNIFAR, ENNIFAR ROMBY 2D Gel isolation Nano-LC-MS/MS Posttranscriptional tRNA modifications, Unité ARN

Bernacchi, S

Dynamic Light Scattering Analysis on RNA Associated to Proteins Book Chapter

Arluison, V; Wien, F (Ed.): RNA Spectroscopy: Methods and Protocols, 2113 , p. 31-39, Springer Protocols, Humana Press, New York, NY, 2020, ISBN: 32006306.

Résumé | Liens | BibTeX | Étiquettes: MARQUET PAILLART Dynamic light scattering Protein-RNA interactions Hydrodynamic radius Diffusion coefficient Pr55Gag precursor Viral genomic RNA Viral spliced RNA Viral assembly, Unité ARN

Bernacchi, S; Ennifar, E

Analysis of the HIV-1 Genomic RNA Dimerization Initiation Site Binding to Aminoglycoside Antibiotics Using Isothermal Titration Calorimetry Book Chapter

Arluison, V; Wien, F (Ed.): RNA Spectroscopy: Methods and Protocols, 2113 , p. 237-250, Springer Protocols, Humana Press, New York, NY, 2020, ISBN: 32006318.

Résumé | Liens | BibTeX | Étiquettes: ENNIFAR, ENNIFAR MARQUET PAILLART HIV-1 Viral RNA Aminoglycosides Dimerization initiation site ITC Thermodynamics RNA–drug interaction, Unité ARN

Bouhedda, F; Fam, K T; Collot, M; Autour, A; Marzi, S; Klymchenko, A; Ryckelynck, M

A dimerization-based fluorogenic dye-aptamer module for RNA imaging in live cells Article de journal

Nat Chem Biol, 16 (1), p. 69-76, 2020, ISBN: 31636432.

Résumé | Liens | BibTeX | Étiquettes: RYCKELYNCK, Unité ARN

Boutant, E; Bonzi, J; Anton, H; Nasim, Bin M; Cathagne, R; Real, E; Dujardin, D; Carl, P; Didier, P; Paillart, J C; Marquet, R; Mely, Y; de Rocquigny, H; Bernacchi, S

Zinc Fingers in HIV-1 Gag Precursor Are Not Equivalent for gRNA Recruitment at the Plasma Membrane Article de journal

Biophys J, 119 (2), p. 419-433, 2020, ISBN: 32574557.

Résumé | Liens | BibTeX | Étiquettes: MARQUET, MARQUET PAILLART, PAILLART, Unité ARN

Brillet, K; Martinez-Zapien, D; Bec, G; Ennifar, E; Dock-Bregeon, A C; Lebars, I

Different views of the dynamic landscape covered by the 5'-hairpin of the 7SK small nuclear RNA Article de journal

RNA, 26 (9), p. 1184-1197, 2020, ISBN: 32430362.

Résumé | Liens | BibTeX | Étiquettes: ENNIFAR, ENNIFAR 7SK HEXIM RNA Tat structure, Unité ARN

Chernorudskiy, A; Varone, E; Colombo, S F; Fumagalli, S; Cagnotto, A; Cattaneo, A; Briens, M; Baltzinger, M; Kuhn, L; Bachi, A; Berardi, A; Salmona, M; Musco, G; Borgese, N; Lescure, A; Zito, E

Selenoprotein N is an endoplasmic reticulum calcium sensor that links luminal calcium levels to a redox activity Article de journal

Proc Natl Acad Sci U S A, 117 (35), p. 21288-21298, 2020, ISBN: 32817544.

Résumé | Liens | BibTeX | Étiquettes: LESCURE, LESCURE calcium sensor SEPN1 endoplasmic reticulum stress of the endoplasmic reticulum, Unité ARN

de Wijn, R; Rollet, K; Engilberge, S; McEwen, A G; Hennig, O; Betat, H; Mörl, M; Riobé, F; Maury, O; Girard, E; Bénas, P; Lorber, B; Sauter, C

Monitoring the Production of High Diffraction-Quality Crystals of Two Enzymes in Real Time Using In Situ Dynamic Light Scattering Article de journal

Crystals, 10 (2), p. 65, 2020.

Résumé | Liens | BibTeX | Étiquettes: FRUGIER enzyme crystallization dynamic light scattering nucleation nucleant Tb-Xo4 crystallophore microcrystals nanocrystals X-ray diffraction XtalController, Unité ARN

Desgranges, E; Caldelari, I; Marzi, S; Lalaouna, D

Navigation through the twists and turns of RNA sequencing technologies: Application to bacterial regulatory RNAs Article de journal

Biochim Biophys Acta Gene Regul Mech, 1863 (3), p. 194506, 2020, ISBN: 32068131.

Résumé | Liens | BibTeX | Étiquettes: ROMBY Bacteria Post-transcriptional regulation RNA sequencing Regulatory network Small regulatory RNA Targetome, Unité ARN

Gasser, C; Delazer, I; Neuner, E; Pascher, K; Brillet, K; Klotz, S; Trixl, L; Himmelstoß, M; Ennifar, E; Rieder, D; Lusser, A; Micura, R

Thioguanosine Conversion Enables mRNA-Lifetime Evaluation by RNA Sequencing Using Double Metabolic Labeling (TUC-seq DUAL) Article de journal

Angew Chem Int Ed Engl, 59 (17), p. 6881-6886, 2020, ISBN: 31999864.

Résumé | Liens | BibTeX | Étiquettes: ENNIFAR, ENNIFAR RNA sequencing RNA structures gene expression nucleoside modifications oligonucleotides, Unité ARN

Georg, J; Lalaouna, D; Hou, S; Lott, S C; Caldelari, I; Marzi, S; Hess, W R; Romby, P

The power of cooperation: Experimental and computational approaches in the functional characterization of bacterial sRNAs Article de journal

Mol Microbiol, 113 (3), p. 603-612, 2020, ISBN: 31705780.

Résumé | Liens | BibTeX | Étiquettes: ROMBY, ROMBY Staphylococcus aureus CopraRNA MAPS post-transcriptional regulation sRNAs, Unité ARN

Ghosh, S; Guimaraes, J C; Lanzafame, M; Schmidt, A; Syed, A P; Dimitriades, B; Börsch, A; Ghosh, S; Mittal, N; Montavon, T; Correia, A L; Danner, J; Meister, G; Terracciano, L M; Pfeffer, S; Piscuoglio, S; Zavolan, M

Prevention of dsRNA-induced interferon signaling by AGO1x is linked to breast cancer cell proliferation Article de journal

EMBO J, p. in press, 2020, ISBN: 32812257.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, PFEFFER Argonaute 1 breast cancer endogenous dsRNA interferon response translation readthrough, Unité ARN

Girardi, E; Pfeffer, S; Baumert, T F; Majzoub, K

Roadblocks and fast tracks: How RNA binding proteins affect the viral RNA journey in the cell Article de journal

Semin Cell Dev Biol, p. in press, 2020, ISBN: 32847707.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, PFEFFER Innate Immunity RNA biology RNA viruses Technology Viral RNA sensing Viral Translation Virology., Unité ARN

Herzog, K; Bandiera, S; Pernot, S; Fauvelle, C; Jühling, F; Weiss, A; Bull, A; Durand, S C; Chane-Woon-Ming, B; Pfeffer, S; Mercey, M; Lerat, H; Meunier, J C; Raffelsberger, W; Brino, L; Baumert, T F; Zeisel, M B

Functional microRNA screen uncovers O-linked N-acetylglucosamine transferase as a host factor modulating hepatitis C virus morphogenesis and infectivity Article de journal

Gut, 69 (2), p. 380-392, 2020, ISBN: 31076402.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, PFEFFER HCV hepatitis C hepatocyte molecular mechanisms, Unité ARN

Injarabian, L; Scherlinger, M; Devin, A; Ransac, S; Lykkesfeldt, J; Marteyn, B S

Ascorbate maintains a low plasma oxygen level Article de journal

Sci Rep, 10 (1), p. 10659, 2020, ISBN: 32606354.

Résumé | Liens | BibTeX | Étiquettes: MARTEYN, Unité ARN

Kanja, M; Cappy, P; Levy, N; Oladosu, O; Schmidt, S; Rossolillo, P; Winter, F; Gasser, R; Moog, C; Ruff, M; Negroni, M; Lener, D

NKNK: a New Essential Motif in the C-Terminal Domain of HIV-1 Group M Integrases Article de journal

J Virol, 94 (20), p. e01035-01020, 2020, ISBN: 32727879.

Résumé | Liens | BibTeX | Étiquettes: NEGRONI, NEGRONI evolution human immunodeficiency virus integrase phylogenetic groups, Unité ARN