Publications
2009 |
Olieric, V; Rieder, U; Lang, K; Serganov, A; Schulze-Briese, C; Micura, R; Dumas, P; Ennifar, E A fast selenium derivatization strategy for crystallization and phasing of RNA structures Article de journal RNA, 15 (4), p. 707-715, 2009, ISBN: 19228585, (1469-9001 (Electronic) Journal Article Research Support, Non-U.S. Gov't Validation Studies). Résumé | Liens | BibTeX | Étiquettes: DUMAS Base Sequence Crystallography, ENNIFAR, Unité ARN, X-Ray/*methods HIV-1/chemistry/genetics Nucleic Acid Conformation RNA/*chemistry Selenium/*metabolism Staining and Labeling/*methods @article{, title = {A fast selenium derivatization strategy for crystallization and phasing of RNA structures}, author = {V Olieric and U Rieder and K Lang and A Serganov and C Schulze-Briese and R Micura and P Dumas and E Ennifar}, url = {http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=19228585}, isbn = {19228585}, year = {2009}, date = {2009-01-01}, journal = {RNA}, volume = {15}, number = {4}, pages = {707-715}, abstract = {Site-specific 2'-methylseleno RNA labeling is a promising tool for tackling the phase problem in RNA crystallography. We have developed an efficient strategy for crystallization and structure determination of RNA and RNA/protein complexes based on preliminary crystallization screening of 2'-OCH(3)-modified RNA sequences, prior to the replacement of 2'-OCH(3) groups with their 2'-SeCH(3) counterparts. The method exploits the similar crystallization properties of 2'-OCH(3)- and 2'-SeCH(3)-modified RNAs and has been successfully validated for two test cases. In addition, our data show that 2'-SeCH(3)-modified RNA have an increased resistance to X-ray radiolysis in comparison with commonly used 5-halogen-modified RNA, which permits collection of experimental electron density maps of remarkable quality.}, note = {1469-9001 (Electronic) Journal Article Research Support, Non-U.S. Gov't Validation Studies}, keywords = {DUMAS Base Sequence Crystallography, ENNIFAR, Unité ARN, X-Ray/*methods HIV-1/chemistry/genetics Nucleic Acid Conformation RNA/*chemistry Selenium/*metabolism Staining and Labeling/*methods}, pubstate = {published}, tppubtype = {article} } Site-specific 2'-methylseleno RNA labeling is a promising tool for tackling the phase problem in RNA crystallography. We have developed an efficient strategy for crystallization and structure determination of RNA and RNA/protein complexes based on preliminary crystallization screening of 2'-OCH(3)-modified RNA sequences, prior to the replacement of 2'-OCH(3) groups with their 2'-SeCH(3) counterparts. The method exploits the similar crystallization properties of 2'-OCH(3)- and 2'-SeCH(3)-modified RNAs and has been successfully validated for two test cases. In addition, our data show that 2'-SeCH(3)-modified RNA have an increased resistance to X-ray radiolysis in comparison with commonly used 5-halogen-modified RNA, which permits collection of experimental electron density maps of remarkable quality. |